Rockman6

Rockman6 / CellSim-3D-Multicellular-Biology-Drug-Testing-Simulator

Public

Computational Cell Biology Simulator & In Silico Drug Testing Platform — C++20/Metal, Novak-Tyson CDK ODE, Fick Diffusion, PhysiPKPD Pharmacodynamics

3d-visualization agent-based-model cell-cycle cell-simulation computational-biology
10
1
100% credibility
Found Mar 24, 2026 at 10 stars -- GitGems finds repos before they trend. Get early access to the next one.
Sign Up Free
AI Analysis
Objective-C++
AI Summary

A real-time 3D simulator for observing multicellular biology including cell cycles, metabolism, and testing chemotherapy drugs on virtual colonies.

How It Works

1
🔍 Discover the Simulator

You find this amazing 3D tool online that lets you watch virtual cells grow and test real medicines on them, like a window into biology lab experiments.

2
💻 Get Ready on Your Mac

You download the files and follow a few simple steps to prepare your computer, just like installing any app.

3
🚀 Launch and Explore

You open the simulator and instantly see glowing, translucent cells starting to divide and form a colony on a plate, feeling like you're peering into a microscope.

4
⏱️ Watch Cells Grow

You speed up time to let the cells multiply until they fill the plate, observing how they slow down when crowded.

5
Choose How to Add Medicine
🛁
Even Bath

Spread medicine across the whole colony to test overall impact.

💥
Spot Injection

Drop medicine in one area and watch it spread through the cells.

6
📈 See Drug Effects Unfold

Cells start dying, stopping growth, or changing behavior based on the medicine's strength, with live charts showing what's happening inside.

📊 Save Your Results

You export charts and data to analyze how well the medicine works, gaining insights like a real researcher.

Sign up to see the full architecture

5 more

Sign Up Free

Star Growth

See how this repo grew from 10 to 10 stars Sign Up Free
Repurpose This Repo

Repurpose is a Pro feature

Generate ready-to-use prompts for X threads, LinkedIn posts, blog posts, YouTube scripts, and more -- with full repo context baked in.

Unlock Repurpose
AI-Generated Review

What is CellSim-3D-Multicellular-Biology-Drug-Testing-Simulator?

CellSim lets you grow 3D virtual cell colonies in real time and test chemotherapy drugs like Cisplatin or Doxorubicin right in the simulator, modeling everything from cell cycle progression to nutrient gradients and resistance buildup. It's a computational cell biology platform for in silico drug screening, built in C++20 with Apple Metal for smooth GPU-accelerated rendering on macOS. You get interactive 3D views of translucent cells with organelles, live stats panels, time-series plots, and CSV exports for deeper analysis.

Why is it gaining traction?

Unlike basic 2D spreadsheets or heavy frameworks like PhysiCell, CellSim delivers instant visual feedback on complex biology—watch colonies hit confluence via contact inhibition, switch to Warburg metabolism under hypoxia, or die from dose-dependent pharmacodynamics. Pre-built drugs with Hill equation responses and easy apply/washout workflows make it dead simple for quick experiments in computational cell biophysics or physiology. The ImGui interface packs population stats, phase distributions, and export controls into one window.

Who should use this?

Computational biologists simulating tumor spheroids or github computational biology projects. Pharmacologists testing drug diffusion and resistance in virtual tissues. Researchers in computational cell model workshops studying telomere erosion, apoptosis, or multi-timescale dynamics like CDK oscillators.

Verdict

Solid prototype for macOS-based computational cell analytics in biology, with thorough docs and MIT license easing experimentation despite 10 stars and 1.0% credibility score. Fork it for custom tweaks if you're prototyping drug tests; pass if you need cross-platform maturity or tests.

(198 words)

Sign up to read the full AI review Sign Up Free

Similar repos coming soon.